Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim9Q8C7M3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim9Q8C7M3 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Serp2-204ENSMUST00000228055 705 ntBASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim9Q8C7M3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim9Q8C7M3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim9Q8C7M3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim9Q8C7M3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim9Q8C7M3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim9Q8C7M3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim9Q8C7M3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Trim9Q8C7M3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.58■■□□□ 1.05
Trim9Q8C7M3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim9Q8C7M3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Trim9Q8C7M3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim9Q8C7M3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.58■■□□□ 1.04
Trim9Q8C7M3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim9Q8C7M3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Gm27454-201ENSMUST00000185090 204 ntBASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim9Q8C7M3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Gm12821-201ENSMUST00000120022 600 ntBASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Mir7075-201ENSMUST00000184187 82 ntBASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trim9Q8C7M3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim9Q8C7M3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim9Q8C7M3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trim9Q8C7M3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms