Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim35Q8C006 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim35Q8C006 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim35Q8C006 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim35Q8C006 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim35Q8C006 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim35Q8C006 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.8■□□□□ 0.76
Trim35Q8C006 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim35Q8C006 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim35Q8C006 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim35Q8C006 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim35Q8C006 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC19.79■□□□□ 0.76
Trim35Q8C006 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
Trim35Q8C006 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim35Q8C006 AC159246.1-201ENSMUST00000214478 249 ntBASIC19.79■□□□□ 0.76
Trim35Q8C006 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim35Q8C006 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim35Q8C006 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim35Q8C006 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim35Q8C006 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim35Q8C006 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim35Q8C006 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim35Q8C006 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Gm12439-201ENSMUST00000117162 365 ntBASIC19.78■□□□□ 0.76
Trim35Q8C006 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Gm27454-201ENSMUST00000185090 204 ntBASIC19.78■□□□□ 0.76
Trim35Q8C006 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim35Q8C006 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim35Q8C006 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim35Q8C006 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim35Q8C006 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim35Q8C006 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim35Q8C006 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim35Q8C006 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.77■□□□□ 0.76
Trim35Q8C006 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim35Q8C006 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Trim35Q8C006 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim35Q8C006 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim35Q8C006 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.76■□□□□ 0.75
Trim35Q8C006 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Trim35Q8C006 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim35Q8C006 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim35Q8C006 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim35Q8C006 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim35Q8C006 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim35Q8C006 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Trim35Q8C006 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim35Q8C006 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim35Q8C006 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.75■□□□□ 0.75
Trim35Q8C006 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim35Q8C006 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim35Q8C006 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim35Q8C006 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim35Q8C006 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.73■□□□□ 0.75
Trim35Q8C006 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim35Q8C006 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms