Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Trim36Q80WG7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim36Q80WG7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim36Q80WG7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim36Q80WG7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim36Q80WG7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim36Q80WG7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim36Q80WG7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim36Q80WG7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim36Q80WG7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim36Q80WG7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim36Q80WG7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.77■□□□□ 0.59
Trim36Q80WG7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.76■□□□□ 0.59
Trim36Q80WG7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim36Q80WG7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim36Q80WG7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim36Q80WG7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim36Q80WG7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.73■□□□□ 0.59
Trim36Q80WG7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim36Q80WG7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms