Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChpfQ6IQX7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ChpfQ6IQX7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChpfQ6IQX7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ChpfQ6IQX7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChpfQ6IQX7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ChpfQ6IQX7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChpfQ6IQX7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ChpfQ6IQX7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChpfQ6IQX7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21■□□□□ 0.95
ChpfQ6IQX7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21■□□□□ 0.95
ChpfQ6IQX7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ChpfQ6IQX7 Mir5133-201ENSMUST00000174955 77 ntBASIC21■□□□□ 0.95
ChpfQ6IQX7 Gm42555-201ENSMUST00000199304 1039 ntBASIC21■□□□□ 0.95
ChpfQ6IQX7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ChpfQ6IQX7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ChpfQ6IQX7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21■□□□□ 0.95
ChpfQ6IQX7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ChpfQ6IQX7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ChpfQ6IQX7 Gm12504-201ENSMUST00000120860 2231 ntBASIC21■□□□□ 0.95
ChpfQ6IQX7 Gm20634-201ENSMUST00000090779 2956 ntBASIC21■□□□□ 0.95
ChpfQ6IQX7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChpfQ6IQX7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChpfQ6IQX7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.99■□□□□ 0.95
ChpfQ6IQX7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChpfQ6IQX7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ChpfQ6IQX7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ChpfQ6IQX7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChpfQ6IQX7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChpfQ6IQX7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.96■□□□□ 0.95
ChpfQ6IQX7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Gm13146-201ENSMUST00000118508 780 ntBASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChpfQ6IQX7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Gm38205-201ENSMUST00000192243 258 ntBASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ChpfQ6IQX7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChpfQ6IQX7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Gm12441-201ENSMUST00000121806 588 ntBASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ChpfQ6IQX7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChpfQ6IQX7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms