Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Col11a2Q64739 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Col11a2Q64739 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col11a2Q64739 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.2■■□□□ 1.46
Col11a2Q64739 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col11a2Q64739 AC130671.1-201ENSMUST00000227384 1237 ntBASIC24.19■■□□□ 1.46
Col11a2Q64739 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col11a2Q64739 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Col11a2Q64739 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col11a2Q64739 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Col11a2Q64739 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC24.18■■□□□ 1.46
Col11a2Q64739 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Col11a2Q64739 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Col11a2Q64739 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Col11a2Q64739 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col11a2Q64739 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col11a2Q64739 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col11a2Q64739 Gm37563-201ENSMUST00000192580 1513 ntBASIC24.17■■□□□ 1.46
Col11a2Q64739 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col11a2Q64739 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col11a2Q64739 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Col11a2Q64739 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Col11a2Q64739 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Gm13836-201ENSMUST00000121159 501 ntBASIC24.16■■□□□ 1.46
Col11a2Q64739 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Col11a2Q64739 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Col11a2Q64739 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Col11a2Q64739 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col11a2Q64739 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Col11a2Q64739 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col11a2Q64739 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col11a2Q64739 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Col11a2Q64739 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
Col11a2Q64739 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col11a2Q64739 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC24.14■■□□□ 1.45
Col11a2Q64739 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Col11a2Q64739 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col11a2Q64739 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Col11a2Q64739 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC24.14■■□□□ 1.45
Col11a2Q64739 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Col11a2Q64739 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col11a2Q64739 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC24.13■■□□□ 1.45
Col11a2Q64739 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col11a2Q64739 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col11a2Q64739 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col11a2Q64739 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Col11a2Q64739 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col11a2Q64739 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Col11a2Q64739 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC24.13■■□□□ 1.45
Col11a2Q64739 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Col11a2Q64739 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.13■■□□□ 1.45
Col11a2Q64739 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col11a2Q64739 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col11a2Q64739 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col11a2Q64739 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col11a2Q64739 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC24.12■■□□□ 1.45
Col11a2Q64739 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC24.12■■□□□ 1.45
Col11a2Q64739 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Col11a2Q64739 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Col11a2Q64739 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Col11a2Q64739 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Col11a2Q64739 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col11a2Q64739 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col11a2Q64739 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Col11a2Q64739 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col11a2Q64739 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Col11a2Q64739 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC24.1■■□□□ 1.45
Col11a2Q64739 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col11a2Q64739 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col11a2Q64739 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col11a2Q64739 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col11a2Q64739 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col11a2Q64739 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col11a2Q64739 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col11a2Q64739 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Col11a2Q64739 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Col11a2Q64739 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
Col11a2Q64739 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC24.09■■□□□ 1.45
Col11a2Q64739 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col11a2Q64739 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC24.08■■□□□ 1.45
Col11a2Q64739 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col11a2Q64739 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Col11a2Q64739 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Col11a2Q64739 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col11a2Q64739 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col11a2Q64739 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms