Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Commd3Q63829 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Commd3Q63829 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Commd3Q63829 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Commd3Q63829 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Commd3Q63829 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Commd3Q63829 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Commd3Q63829 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Commd3Q63829 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.26■□□□□ 0.19
Commd3Q63829 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Commd3Q63829 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Commd3Q63829 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Commd3Q63829 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Commd3Q63829 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.25■□□□□ 0.19
Commd3Q63829 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.25■□□□□ 0.19
Commd3Q63829 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Commd3Q63829 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.24■□□□□ 0.19
Commd3Q63829 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Commd3Q63829 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Commd3Q63829 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Commd3Q63829 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Commd3Q63829 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Commd3Q63829 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.23■□□□□ 0.19
Commd3Q63829 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Commd3Q63829 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Commd3Q63829 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Commd3Q63829 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Commd3Q63829 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Commd3Q63829 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.22■□□□□ 0.19
Commd3Q63829 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Commd3Q63829 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.22■□□□□ 0.19
Commd3Q63829 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.22■□□□□ 0.19
Commd3Q63829 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Commd3Q63829 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Commd3Q63829 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.21■□□□□ 0.19
Commd3Q63829 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Commd3Q63829 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.21■□□□□ 0.19
Commd3Q63829 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
Commd3Q63829 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Commd3Q63829 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Commd3Q63829 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Commd3Q63829 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Commd3Q63829 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms