Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Mir6236-201ENSMUST00000184437 123 ntBASIC16.67■□□□□ 0.26
Sox19Q62249 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.67■□□□□ 0.26
Sox19Q62249 Gm7143-201ENSMUST00000222811 859 ntBASIC16.67■□□□□ 0.26
Sox19Q62249 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Sox19Q62249 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sox19Q62249 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sox19Q62249 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sox19Q62249 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.66■□□□□ 0.26
Sox19Q62249 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.66■□□□□ 0.26
Sox19Q62249 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sox19Q62249 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Sox19Q62249 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox19Q62249 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.66■□□□□ 0.26
Sox19Q62249 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sox19Q62249 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sox19Q62249 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.65■□□□□ 0.26
Sox19Q62249 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sox19Q62249 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox19Q62249 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sox19Q62249 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox19Q62249 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sox19Q62249 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sox19Q62249 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sox19Q62249 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.64■□□□□ 0.25
Sox19Q62249 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox19Q62249 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox19Q62249 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox19Q62249 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.63■□□□□ 0.25
Sox19Q62249 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Sox19Q62249 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox19Q62249 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox19Q62249 Gm11175-201ENSMUST00000116172 543 ntBASIC16.63■□□□□ 0.25
Sox19Q62249 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox19Q62249 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox19Q62249 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox19Q62249 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.63■□□□□ 0.25
Sox19Q62249 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox19Q62249 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox19Q62249 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox19Q62249 Gm45444-201ENSMUST00000211394 898 ntBASIC16.62■□□□□ 0.25
Sox19Q62249 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.62■□□□□ 0.25
Sox19Q62249 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox19Q62249 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sox19Q62249 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sox19Q62249 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sox19Q62249 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.61■□□□□ 0.25
Sox19Q62249 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox19Q62249 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms