Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8d-2Q5R1B6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Mir6982-201ENSMUST00000184354 68 ntBASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Trav8d-2Q5R1B6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav8d-2Q5R1B6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav8d-2Q5R1B6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav8d-2Q5R1B6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav8d-2Q5R1B6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav8d-2Q5R1B6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Gm26524-201ENSMUST00000192339 390 ntBASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav8d-2Q5R1B6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Rab3c-203ENSMUST00000224180 967 ntBASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav8d-2Q5R1B6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Gm7977-201ENSMUST00000193787 748 ntBASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav8d-2Q5R1B6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms