Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col19a1Q0VF58 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Col19a1Q0VF58 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col19a1Q0VF58 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.14■□□□□ 0.98
Col19a1Q0VF58 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col19a1Q0VF58 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col19a1Q0VF58 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col19a1Q0VF58 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col19a1Q0VF58 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col19a1Q0VF58 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col19a1Q0VF58 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.13■□□□□ 0.97
Col19a1Q0VF58 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.13■□□□□ 0.97
Col19a1Q0VF58 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col19a1Q0VF58 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col19a1Q0VF58 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col19a1Q0VF58 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col19a1Q0VF58 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
Col19a1Q0VF58 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col19a1Q0VF58 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col19a1Q0VF58 Gm11643-201ENSMUST00000119578 864 ntBASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col19a1Q0VF58 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col19a1Q0VF58 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Gm37055-201ENSMUST00000191866 133 ntBASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Gm9987-201ENSMUST00000069768 567 ntBASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Col19a1Q0VF58 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col19a1Q0VF58 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.08■□□□□ 0.97
Col19a1Q0VF58 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col19a1Q0VF58 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Col19a1Q0VF58 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col19a1Q0VF58 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col19a1Q0VF58 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col19a1Q0VF58 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col19a1Q0VF58 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col19a1Q0VF58 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col19a1Q0VF58 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col19a1Q0VF58 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col19a1Q0VF58 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col19a1Q0VF58 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col19a1Q0VF58 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col19a1Q0VF58 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.05■□□□□ 0.96
Col19a1Q0VF58 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col19a1Q0VF58 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.04■□□□□ 0.96
Col19a1Q0VF58 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col19a1Q0VF58 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.03■□□□□ 0.96
Col19a1Q0VF58 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col19a1Q0VF58 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms