Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim43bP86448 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Trim43bP86448 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.01■□□□□ 0.79
Trim43bP86448 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43bP86448 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim43bP86448 Gm21956-201ENSMUST00000179946 522 ntBASIC20■□□□□ 0.79
Trim43bP86448 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20■□□□□ 0.79
Trim43bP86448 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trim43bP86448 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43bP86448 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43bP86448 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43bP86448 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43bP86448 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43bP86448 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.99■□□□□ 0.79
Trim43bP86448 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim43bP86448 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trim43bP86448 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.99■□□□□ 0.79
Trim43bP86448 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Trim43bP86448 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim43bP86448 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim43bP86448 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim43bP86448 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43bP86448 Golph3-205ENSMUST00000228671 2842 ntBASIC19.98■□□□□ 0.79
Trim43bP86448 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim43bP86448 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43bP86448 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Gm7143-201ENSMUST00000222811 859 ntBASIC19.97■□□□□ 0.79
Trim43bP86448 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.97■□□□□ 0.79
Trim43bP86448 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43bP86448 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim43bP86448 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43bP86448 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trim43bP86448 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim43bP86448 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Trim43bP86448 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
Trim43bP86448 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.94■□□□□ 0.78
Trim43bP86448 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Trim43bP86448 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim43bP86448 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.94■□□□□ 0.78
Trim43bP86448 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43bP86448 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43bP86448 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim43bP86448 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.93■□□□□ 0.78
Trim43bP86448 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43bP86448 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim43bP86448 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim43bP86448 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms