Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SgcaP82350 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SgcaP82350 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
SgcaP82350 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcaP82350 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcaP82350 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SgcaP82350 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.31■□□□□ 0.2
SgcaP82350 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcaP82350 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcaP82350 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SgcaP82350 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.3■□□□□ 0.2
SgcaP82350 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SgcaP82350 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
SgcaP82350 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SgcaP82350 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SgcaP82350 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SgcaP82350 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SgcaP82350 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.29■□□□□ 0.2
SgcaP82350 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.29■□□□□ 0.2
SgcaP82350 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SgcaP82350 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.28■□□□□ 0.2
SgcaP82350 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.28■□□□□ 0.2
SgcaP82350 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SgcaP82350 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SgcaP82350 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SgcaP82350 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SgcaP82350 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.27■□□□□ 0.2
SgcaP82350 Gm11175-201ENSMUST00000116172 543 ntBASIC16.27■□□□□ 0.2
SgcaP82350 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SgcaP82350 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SgcaP82350 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
SgcaP82350 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SgcaP82350 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.26■□□□□ 0.19
SgcaP82350 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SgcaP82350 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SgcaP82350 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.25■□□□□ 0.19
SgcaP82350 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SgcaP82350 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms