Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Krt6aP50446 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt6aP50446 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.37■□□□□ 0.69
Krt6aP50446 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt6aP50446 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Krt6aP50446 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Krt6aP50446 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.36■□□□□ 0.69
Krt6aP50446 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Krt6aP50446 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Krt6aP50446 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.35■□□□□ 0.69
Krt6aP50446 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Krt6aP50446 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.34■□□□□ 0.69
Krt6aP50446 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.34■□□□□ 0.69
Krt6aP50446 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Krt6aP50446 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.34■□□□□ 0.69
Krt6aP50446 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Krt6aP50446 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.33■□□□□ 0.69
Krt6aP50446 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Krt6aP50446 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt6aP50446 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
Krt6aP50446 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Krt6aP50446 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt6aP50446 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt6aP50446 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.33■□□□□ 0.68
Krt6aP50446 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt6aP50446 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Krt6aP50446 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Krt6aP50446 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt6aP50446 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt6aP50446 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt6aP50446 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt6aP50446 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Krt6aP50446 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Krt6aP50446 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Krt6aP50446 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.3■□□□□ 0.68
Krt6aP50446 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt6aP50446 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.29■□□□□ 0.68
Krt6aP50446 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt6aP50446 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt6aP50446 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.28■□□□□ 0.68
Krt6aP50446 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Krt6aP50446 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Krt6aP50446 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms