Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hist1h1dP43277 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Hist1h1dP43277 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Etf1-202ENSMUST00000180351 108 ntBASIC16.5■□□□□ 0.23
Hist1h1dP43277 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hist1h1dP43277 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hist1h1dP43277 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.49■□□□□ 0.23
Hist1h1dP43277 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hist1h1dP43277 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.48■□□□□ 0.23
Hist1h1dP43277 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hist1h1dP43277 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Golph3-205ENSMUST00000228671 2842 ntBASIC16.47■□□□□ 0.23
Hist1h1dP43277 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hist1h1dP43277 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.46■□□□□ 0.23
Hist1h1dP43277 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hist1h1dP43277 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.45■□□□□ 0.22
Hist1h1dP43277 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1dP43277 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.45■□□□□ 0.22
Hist1h1dP43277 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.45■□□□□ 0.22
Hist1h1dP43277 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms