Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.35■□□□□ 0.69
Cd9P40240 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.35■□□□□ 0.69
Cd9P40240 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.35■□□□□ 0.69
Cd9P40240 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.35■□□□□ 0.69
Cd9P40240 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cd9P40240 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.35■□□□□ 0.69
Cd9P40240 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd9P40240 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.34■□□□□ 0.69
Cd9P40240 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cd9P40240 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.34■□□□□ 0.69
Cd9P40240 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Cd9P40240 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd9P40240 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cd9P40240 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cd9P40240 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.33■□□□□ 0.68
Cd9P40240 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cd9P40240 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.33■□□□□ 0.68
Cd9P40240 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.32■□□□□ 0.68
Cd9P40240 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd9P40240 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd9P40240 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd9P40240 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cd9P40240 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.32■□□□□ 0.68
Cd9P40240 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd9P40240 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd9P40240 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd9P40240 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cd9P40240 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.31■□□□□ 0.68
Cd9P40240 Mir7075-201ENSMUST00000184187 82 ntBASIC19.31■□□□□ 0.68
Cd9P40240 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd9P40240 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cd9P40240 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cd9P40240 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Cd9P40240 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd9P40240 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cd9P40240 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd9P40240 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cd9P40240 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd9P40240 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd9P40240 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd9P40240 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.3■□□□□ 0.68
Cd9P40240 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd9P40240 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cd9P40240 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd9P40240 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cd9P40240 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd9P40240 Smad6-203ENSMUST00000179458 273 ntBASIC19.29■□□□□ 0.68
Cd9P40240 Gm43173-201ENSMUST00000202246 593 ntBASIC19.29■□□□□ 0.68
Cd9P40240 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.29■□□□□ 0.68
Cd9P40240 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd9P40240 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cd9P40240 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd9P40240 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Cd9P40240 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd9P40240 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd9P40240 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd9P40240 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.28■□□□□ 0.68
Cd9P40240 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd9P40240 Gm27454-201ENSMUST00000185090 204 ntBASIC19.28■□□□□ 0.68
Cd9P40240 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.28■□□□□ 0.68
Cd9P40240 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd9P40240 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd9P40240 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd9P40240 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cd9P40240 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Cd9P40240 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd9P40240 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cd9P40240 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms