Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sox5P35710 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sox5P35710 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sox5P35710 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Sox5P35710 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.35■■□□□ 1.01
Sox5P35710 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.35■■□□□ 1.01
Sox5P35710 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sox5P35710 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.35■■□□□ 1.01
Sox5P35710 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox5P35710 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox5P35710 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox5P35710 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox5P35710 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sox5P35710 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Sox5P35710 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox5P35710 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sox5P35710 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.34■■□□□ 1.01
Sox5P35710 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
Sox5P35710 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox5P35710 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox5P35710 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sox5P35710 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sox5P35710 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sox5P35710 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sox5P35710 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.33■■□□□ 1.01
Sox5P35710 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox5P35710 AA386476-201ENSMUST00000098781 1665 ntBASIC21.33■■□□□ 1
Sox5P35710 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sox5P35710 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sox5P35710 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox5P35710 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox5P35710 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.32■■□□□ 1
Sox5P35710 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox5P35710 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox5P35710 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Sox5P35710 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sox5P35710 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sox5P35710 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.31■■□□□ 1
Sox5P35710 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sox5P35710 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
Sox5P35710 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.31■■□□□ 1
Sox5P35710 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sox5P35710 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox5P35710 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Sox5P35710 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
Sox5P35710 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.3■■□□□ 1
Sox5P35710 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.3■■□□□ 1
Sox5P35710 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Sox5P35710 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sox5P35710 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Sox5P35710 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox5P35710 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox5P35710 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.29■■□□□ 1
Sox5P35710 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox5P35710 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox5P35710 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sox5P35710 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sox5P35710 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.28■■□□□ 1
Sox5P35710 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.28■■□□□ 1
Sox5P35710 Gm5812-201ENSMUST00000061073 957 ntBASIC21.28■■□□□ 1
Sox5P35710 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.28■■□□□ 1
Sox5P35710 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox5P35710 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sox5P35710 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sox5P35710 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sox5P35710 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.27■■□□□ 1
Sox5P35710 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sox5P35710 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox5P35710 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sox5P35710 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.26■□□□□ 0.99
Sox5P35710 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sox5P35710 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms