Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd74P04441 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd74P04441 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cd74P04441 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd74P04441 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd74P04441 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cd74P04441 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cd74P04441 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.3■□□□□ 0.2
Cd74P04441 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Gm6139-201ENSMUST00000079261 882 ntBASIC16.3■□□□□ 0.2
Cd74P04441 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cd74P04441 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd74P04441 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd74P04441 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd74P04441 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cd74P04441 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd74P04441 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.29■□□□□ 0.2
Cd74P04441 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cd74P04441 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cd74P04441 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd74P04441 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cd74P04441 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Cd74P04441 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.28■□□□□ 0.2
Cd74P04441 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.28■□□□□ 0.2
Cd74P04441 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cd74P04441 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cd74P04441 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd74P04441 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cd74P04441 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd74P04441 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd74P04441 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd74P04441 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cd74P04441 Gm43530-201ENSMUST00000195920 274 ntBASIC16.27■□□□□ 0.2
Cd74P04441 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cd74P04441 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.27■□□□□ 0.19
Cd74P04441 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cd74P04441 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cd74P04441 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cd74P04441 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Cd74P04441 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Cd74P04441 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cd74P04441 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.26■□□□□ 0.19
Cd74P04441 Gm8493-201ENSMUST00000196881 489 ntBASIC16.26■□□□□ 0.19
Cd74P04441 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.26■□□□□ 0.19
Cd74P04441 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.26■□□□□ 0.19
Cd74P04441 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cd74P04441 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cd74P04441 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
Cd74P04441 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cd74P04441 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.25■□□□□ 0.19
Cd74P04441 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.25■□□□□ 0.19
Cd74P04441 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cd74P04441 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cd74P04441 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Cd74P04441 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.24■□□□□ 0.19
Cd74P04441 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.24■□□□□ 0.19
Cd74P04441 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.24■□□□□ 0.19
Cd74P04441 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cd74P04441 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms