Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P04224 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04224 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04224 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.09■□□□□ 0.33
P04224 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04224 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
P04224 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04224 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P04224 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P04224 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
P04224 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.08■□□□□ 0.32
P04224 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.08■□□□□ 0.32
P04224 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P04224 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
P04224 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P04224 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.08■□□□□ 0.32
P04224 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
P04224 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
P04224 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.07■□□□□ 0.32
P04224 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.07■□□□□ 0.32
P04224 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P04224 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.06■□□□□ 0.32
P04224 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
P04224 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.06■□□□□ 0.32
P04224 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
P04224 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P04224 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04224 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04224 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04224 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04224 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P04224 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
P04224 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P04224 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
P04224 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
P04224 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04224 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04224 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04224 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
P04224 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P04224 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.04■□□□□ 0.32
P04224 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04224 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
P04224 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P04224 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.03■□□□□ 0.32
P04224 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
P04224 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
P04224 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P04224 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.03■□□□□ 0.32
P04224 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms