Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hbb-b1P02088 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hbb-b1P02088 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hbb-b1P02088 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hbb-b1P02088 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hbb-b1P02088 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hbb-b1P02088 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hbb-b1P02088 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hbb-b1P02088 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hbb-b1P02088 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hbb-b1P02088 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.82□□□□□ -0.2
Hbb-b1P02088 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hbb-b1P02088 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC13.81□□□□□ -0.2
Hbb-b1P02088 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hbb-b1P02088 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hbb-b1P02088 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.79□□□□□ -0.2
Hbb-b1P02088 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hbb-b1P02088 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hbb-b1P02088 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hbb-b1P02088 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hbb-b1P02088 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hbb-b1P02088 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hbb-b1P02088 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms