Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01800 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01800 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01800 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01800 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01800 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
P01800 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01800 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
P01800 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
P01800 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
P01800 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
P01800 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01800 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01800 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.05■□□□□ 0.32
P01800 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.05■□□□□ 0.32
P01800 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01800 Gm13241-201ENSMUST00000094493 780 ntBASIC17.05■□□□□ 0.32
P01800 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01800 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01800 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01800 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.04■□□□□ 0.32
P01800 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
P01800 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.04■□□□□ 0.32
P01800 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.04■□□□□ 0.32
P01800 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
P01800 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01800 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
P01800 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.03■□□□□ 0.32
P01800 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.03■□□□□ 0.32
P01800 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.03■□□□□ 0.32
P01800 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
P01800 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
P01800 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
P01800 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
P01800 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
P01800 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01800 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01800 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01800 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.02■□□□□ 0.32
P01800 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
P01800 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.02■□□□□ 0.32
P01800 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
P01800 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
P01800 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
P01800 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P01800 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.01■□□□□ 0.31
P01800 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.01■□□□□ 0.31
P01800 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P01800 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P01800 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P01800 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17■□□□□ 0.31
P01800 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
P01800 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
P01800 Gm22238-201ENSMUST00000175222 88 ntBASIC17■□□□□ 0.31
P01800 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17■□□□□ 0.31
P01800 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01800 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01800 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01800 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17■□□□□ 0.31
P01800 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17■□□□□ 0.31
P01800 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17■□□□□ 0.31
P01800 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17■□□□□ 0.31
P01800 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01800 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
P01800 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.99■□□□□ 0.31
P01800 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
P01800 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.99■□□□□ 0.31
P01800 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
P01800 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
P01800 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
P01800 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01800 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms