Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Becn1O88597 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
Becn1O88597 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Becn1O88597 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Becn1O88597 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Becn1O88597 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Becn1O88597 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Becn1O88597 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Becn1O88597 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Becn1O88597 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Becn1O88597 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Becn1O88597 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Becn1O88597 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Becn1O88597 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Becn1O88597 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Becn1O88597 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Becn1O88597 Gm5812-201ENSMUST00000061073 957 ntBASIC22.23■■□□□ 1.15
Becn1O88597 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Becn1O88597 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Becn1O88597 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.23■■□□□ 1.15
Becn1O88597 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Becn1O88597 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.22■■□□□ 1.15
Becn1O88597 Gm35558-201ENSMUST00000222675 2219 ntBASIC22.22■■□□□ 1.15
Becn1O88597 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.22■■□□□ 1.15
Becn1O88597 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.22■■□□□ 1.15
Becn1O88597 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.22■■□□□ 1.15
Becn1O88597 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Becn1O88597 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Becn1O88597 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Becn1O88597 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Becn1O88597 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Becn1O88597 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Becn1O88597 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Becn1O88597 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC22.21■■□□□ 1.15
Becn1O88597 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Becn1O88597 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Becn1O88597 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Becn1O88597 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
Becn1O88597 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Becn1O88597 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Becn1O88597 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.2■■□□□ 1.14
Becn1O88597 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Becn1O88597 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Becn1O88597 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Becn1O88597 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Becn1O88597 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Becn1O88597 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.19■■□□□ 1.14
Becn1O88597 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Becn1O88597 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Becn1O88597 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC22.18■■□□□ 1.14
Becn1O88597 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.18■■□□□ 1.14
Becn1O88597 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Becn1O88597 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.18■■□□□ 1.14
Becn1O88597 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Becn1O88597 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Becn1O88597 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Becn1O88597 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Becn1O88597 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Becn1O88597 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.17■■□□□ 1.14
Becn1O88597 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.17■■□□□ 1.14
Becn1O88597 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.17■■□□□ 1.14
Becn1O88597 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Becn1O88597 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Becn1O88597 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Becn1O88597 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms