Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capns1O88456 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capns1O88456 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Capns1O88456 Golph3-205ENSMUST00000228671 2842 ntBASIC17.97■□□□□ 0.47
Capns1O88456 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Capns1O88456 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Capns1O88456 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Capns1O88456 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Capns1O88456 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.96■□□□□ 0.46
Capns1O88456 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 Gm12922-201ENSMUST00000120626 809 ntBASIC17.95■□□□□ 0.46
Capns1O88456 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.95■□□□□ 0.46
Capns1O88456 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.95■□□□□ 0.46
Capns1O88456 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.95■□□□□ 0.46
Capns1O88456 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.95■□□□□ 0.46
Capns1O88456 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Capns1O88456 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Capns1O88456 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Capns1O88456 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.94■□□□□ 0.46
Capns1O88456 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Capns1O88456 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Capns1O88456 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Capns1O88456 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Capns1O88456 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.93■□□□□ 0.46
Capns1O88456 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Capns1O88456 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.93■□□□□ 0.46
Capns1O88456 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Capns1O88456 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Capns1O88456 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capns1O88456 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.92■□□□□ 0.46
Capns1O88456 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.92■□□□□ 0.46
Capns1O88456 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capns1O88456 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Capns1O88456 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Capns1O88456 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capns1O88456 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Capns1O88456 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Capns1O88456 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capns1O88456 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Capns1O88456 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capns1O88456 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capns1O88456 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capns1O88456 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Capns1O88456 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Capns1O88456 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Capns1O88456 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.9■□□□□ 0.46
Capns1O88456 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Capns1O88456 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.9■□□□□ 0.46
Capns1O88456 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Gm40881-201ENSMUST00000223397 166 ntBASIC17.9■□□□□ 0.46
Capns1O88456 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.9■□□□□ 0.46
Capns1O88456 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Capns1O88456 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Capns1O88456 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.9■□□□□ 0.46
Capns1O88456 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Capns1O88456 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.89■□□□□ 0.46
Capns1O88456 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Capns1O88456 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Capns1O88456 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Capns1O88456 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capns1O88456 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.89■□□□□ 0.45
Capns1O88456 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.89■□□□□ 0.45
Capns1O88456 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.89■□□□□ 0.45
Capns1O88456 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capns1O88456 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capns1O88456 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Capns1O88456 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Capns1O88456 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms