Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tulp3O88413 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tulp3O88413 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tulp3O88413 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Tulp3O88413 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tulp3O88413 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Tulp3O88413 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tulp3O88413 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.19■□□□□ 0.5
Tulp3O88413 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.19■□□□□ 0.5
Tulp3O88413 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.18■□□□□ 0.5
Tulp3O88413 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.18■□□□□ 0.5
Tulp3O88413 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tulp3O88413 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Tulp3O88413 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tulp3O88413 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tulp3O88413 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tulp3O88413 Golph3-205ENSMUST00000228671 2842 ntBASIC18.17■□□□□ 0.5
Tulp3O88413 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tulp3O88413 Gm43530-201ENSMUST00000195920 274 ntBASIC18.17■□□□□ 0.5
Tulp3O88413 Gm40881-201ENSMUST00000223397 166 ntBASIC18.17■□□□□ 0.5
Tulp3O88413 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tulp3O88413 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tulp3O88413 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.16■□□□□ 0.5
Tulp3O88413 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tulp3O88413 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tulp3O88413 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tulp3O88413 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tulp3O88413 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tulp3O88413 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.15■□□□□ 0.5
Tulp3O88413 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tulp3O88413 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tulp3O88413 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tulp3O88413 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tulp3O88413 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Tulp3O88413 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.14■□□□□ 0.5
Tulp3O88413 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Tulp3O88413 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.14■□□□□ 0.49
Tulp3O88413 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tulp3O88413 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.14■□□□□ 0.49
Tulp3O88413 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Tulp3O88413 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Tulp3O88413 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tulp3O88413 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tulp3O88413 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.13■□□□□ 0.49
Tulp3O88413 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Tulp3O88413 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Tulp3O88413 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Tulp3O88413 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tulp3O88413 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tulp3O88413 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Tulp3O88413 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tulp3O88413 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms