Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.68■□□□□ 0.42
Pdlim3O70209 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pdlim3O70209 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pdlim3O70209 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim3O70209 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim3O70209 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.67■□□□□ 0.42
Pdlim3O70209 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pdlim3O70209 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pdlim3O70209 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pdlim3O70209 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pdlim3O70209 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdlim3O70209 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pdlim3O70209 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pdlim3O70209 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.66■□□□□ 0.42
Pdlim3O70209 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdlim3O70209 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Pdlim3O70209 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pdlim3O70209 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.65■□□□□ 0.42
Pdlim3O70209 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.65■□□□□ 0.42
Pdlim3O70209 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Pdlim3O70209 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdlim3O70209 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdlim3O70209 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdlim3O70209 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim3O70209 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim3O70209 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdlim3O70209 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim3O70209 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pdlim3O70209 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pdlim3O70209 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdlim3O70209 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim3O70209 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim3O70209 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim3O70209 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Pdlim3O70209 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.63■□□□□ 0.41
Pdlim3O70209 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim3O70209 Gm9870-201ENSMUST00000063874 645 ntBASIC17.63■□□□□ 0.41
Pdlim3O70209 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdlim3O70209 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim3O70209 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdlim3O70209 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pdlim3O70209 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pdlim3O70209 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim3O70209 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim3O70209 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim3O70209 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.62■□□□□ 0.41
Pdlim3O70209 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim3O70209 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pdlim3O70209 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim3O70209 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim3O70209 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim3O70209 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pdlim3O70209 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.61■□□□□ 0.41
Pdlim3O70209 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.61■□□□□ 0.41
Pdlim3O70209 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms