Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pja1O55176 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.65■□□□□ 0.9
Pja1O55176 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.65■□□□□ 0.9
Pja1O55176 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pja1O55176 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pja1O55176 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
Pja1O55176 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.64■□□□□ 0.89
Pja1O55176 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.64■□□□□ 0.89
Pja1O55176 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pja1O55176 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.63■□□□□ 0.89
Pja1O55176 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.63■□□□□ 0.89
Pja1O55176 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pja1O55176 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pja1O55176 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pja1O55176 AA386476-201ENSMUST00000098781 1665 ntBASIC20.63■□□□□ 0.89
Pja1O55176 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pja1O55176 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pja1O55176 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.62■□□□□ 0.89
Pja1O55176 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.62■□□□□ 0.89
Pja1O55176 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.62■□□□□ 0.89
Pja1O55176 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pja1O55176 Gm5812-201ENSMUST00000061073 957 ntBASIC20.62■□□□□ 0.89
Pja1O55176 Golph3-205ENSMUST00000228671 2842 ntBASIC20.62■□□□□ 0.89
Pja1O55176 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pja1O55176 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pja1O55176 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pja1O55176 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.61■□□□□ 0.89
Pja1O55176 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pja1O55176 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.6■□□□□ 0.89
Pja1O55176 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.6■□□□□ 0.89
Pja1O55176 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Pja1O55176 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pja1O55176 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.6■□□□□ 0.89
Pja1O55176 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Pja1O55176 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Pja1O55176 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pja1O55176 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Pja1O55176 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pja1O55176 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Pja1O55176 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pja1O55176 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pja1O55176 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pja1O55176 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.58■□□□□ 0.89
Pja1O55176 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.58■□□□□ 0.89
Pja1O55176 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pja1O55176 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pja1O55176 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pja1O55176 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Pja1O55176 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pja1O55176 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.58■□□□□ 0.88
Pja1O55176 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pja1O55176 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pja1O55176 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pja1O55176 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pja1O55176 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms