Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Pde6dO55057 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.41■□□□□ 0.06
Pde6dO55057 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Pde6dO55057 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pde6dO55057 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Pde6dO55057 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.41■□□□□ 0.06
Pde6dO55057 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pde6dO55057 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.4■□□□□ 0.06
Pde6dO55057 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.4■□□□□ 0.06
Pde6dO55057 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.4■□□□□ 0.06
Pde6dO55057 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pde6dO55057 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pde6dO55057 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.39■□□□□ 0.05
Pde6dO55057 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.39■□□□□ 0.05
Pde6dO55057 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pde6dO55057 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.39■□□□□ 0.05
Pde6dO55057 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.39■□□□□ 0.05
Pde6dO55057 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pde6dO55057 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.39■□□□□ 0.05
Pde6dO55057 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pde6dO55057 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.38■□□□□ 0.05
Pde6dO55057 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pde6dO55057 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.38■□□□□ 0.05
Pde6dO55057 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pde6dO55057 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.38■□□□□ 0.05
Pde6dO55057 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pde6dO55057 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pde6dO55057 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pde6dO55057 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.36■□□□□ 0.05
Pde6dO55057 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Gm9806-201ENSMUST00000051080 552 ntBASIC15.36■□□□□ 0.05
Pde6dO55057 Gm6311-201ENSMUST00000073790 878 ntBASIC15.36■□□□□ 0.05
Pde6dO55057 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pde6dO55057 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Pde6dO55057 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pde6dO55057 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pde6dO55057 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms