Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.16■□□□□ 0.18
SncaO55042 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SncaO55042 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SncaO55042 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaO55042 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.15■□□□□ 0.18
SncaO55042 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SncaO55042 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaO55042 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SncaO55042 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Gm15820-201ENSMUST00000201566 728 ntBASIC16.14■□□□□ 0.17
SncaO55042 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.14■□□□□ 0.17
SncaO55042 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaO55042 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SncaO55042 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaO55042 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.13■□□□□ 0.17
SncaO55042 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SncaO55042 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaO55042 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaO55042 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaO55042 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaO55042 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.13■□□□□ 0.17
SncaO55042 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SncaO55042 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaO55042 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.12■□□□□ 0.17
SncaO55042 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.12■□□□□ 0.17
SncaO55042 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.12■□□□□ 0.17
SncaO55042 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SncaO55042 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SncaO55042 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SncaO55042 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.11■□□□□ 0.17
SncaO55042 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.11■□□□□ 0.17
SncaO55042 Gm9870-201ENSMUST00000063874 645 ntBASIC16.11■□□□□ 0.17
SncaO55042 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SncaO55042 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.11■□□□□ 0.17
SncaO55042 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SncaO55042 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SncaO55042 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.1■□□□□ 0.17
SncaO55042 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.1■□□□□ 0.17
SncaO55042 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SncaO55042 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SncaO55042 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.09■□□□□ 0.17
SncaO55042 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SncaO55042 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SncaO55042 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SncaO55042 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.09■□□□□ 0.17
SncaO55042 Gm7417-201ENSMUST00000192950 473 ntBASIC16.09■□□□□ 0.17
SncaO55042 Gm43530-201ENSMUST00000195920 274 ntBASIC16.09■□□□□ 0.17
SncaO55042 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms