Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc188F6WEU2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc188F6WEU2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Gm2559-201ENSMUST00000201323 363 ntBASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Gm18101-201ENSMUST00000215769 548 ntBASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc188F6WEU2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc188F6WEU2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 Gm10517-202ENSMUST00000192970 758 ntBASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc188F6WEU2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Dio3-201ENSMUST00000097228 1449 ntBASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc188F6WEU2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccdc188F6WEU2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc188F6WEU2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.04■□□□□ 0.8
Ccdc188F6WEU2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc188F6WEU2 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms