Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.15■□□□□ 0.5
Gm10477F6SW83 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm10477F6SW83 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm10477F6SW83 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.15■□□□□ 0.5
Gm10477F6SW83 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10477F6SW83 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10477F6SW83 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm10477F6SW83 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Gm10477F6SW83 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
Gm10477F6SW83 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.14■□□□□ 0.49
Gm10477F6SW83 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 BC021767-201ENSMUST00000126387 1716 ntBASIC18.14■□□□□ 0.49
Gm10477F6SW83 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gm10477F6SW83 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm10477F6SW83 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Gm10477F6SW83 Gm11599-201ENSMUST00000118720 878 ntBASIC18.13■□□□□ 0.49
Gm10477F6SW83 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10477F6SW83 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10477F6SW83 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10477F6SW83 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10477F6SW83 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm10477F6SW83 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gm10477F6SW83 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Gm7432-201ENSMUST00000210343 879 ntBASIC18.11■□□□□ 0.49
Gm10477F6SW83 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm10477F6SW83 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm10477F6SW83 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm10477F6SW83 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm10477F6SW83 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Gm10477F6SW83 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm10477F6SW83 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms