Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.53■□□□□ 0.4
Shank1D3YZU1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.53■□□□□ 0.4
Shank1D3YZU1 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.53■□□□□ 0.4
Shank1D3YZU1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shank1D3YZU1 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.53■□□□□ 0.4
Shank1D3YZU1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Shank1D3YZU1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank1D3YZU1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank1D3YZU1 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.52■□□□□ 0.4
Shank1D3YZU1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank1D3YZU1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank1D3YZU1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank1D3YZU1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shank1D3YZU1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank1D3YZU1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.52■□□□□ 0.39
Shank1D3YZU1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.52■□□□□ 0.39
Shank1D3YZU1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Shank1D3YZU1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Shank1D3YZU1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Gm10812-201ENSMUST00000099864 546 ntBASIC17.5■□□□□ 0.39
Shank1D3YZU1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.5■□□□□ 0.39
Shank1D3YZU1 Gm6420-201ENSMUST00000193885 723 ntBASIC17.5■□□□□ 0.39
Shank1D3YZU1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shank1D3YZU1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shank1D3YZU1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Shank1D3YZU1 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.48■□□□□ 0.39
Shank1D3YZU1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Shank1D3YZU1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shank1D3YZU1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.47■□□□□ 0.39
Shank1D3YZU1 Gm7977-201ENSMUST00000193787 748 ntBASIC17.47■□□□□ 0.39
Shank1D3YZU1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.47■□□□□ 0.39
Shank1D3YZU1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Shank1D3YZU1 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.47■□□□□ 0.39
Shank1D3YZU1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank1D3YZU1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Shank1D3YZU1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank1D3YZU1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shank1D3YZU1 Mir6982-201ENSMUST00000184354 68 ntBASIC17.46■□□□□ 0.39
Shank1D3YZU1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.46■□□□□ 0.38
Shank1D3YZU1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Shank1D3YZU1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.45■□□□□ 0.38
Shank1D3YZU1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms