Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm11127A7VMS2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm11127A7VMS2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm11127A7VMS2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm11127A7VMS2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.21■□□□□ 0.35
Gm11127A7VMS2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm11127A7VMS2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm11127A7VMS2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm11127A7VMS2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11127A7VMS2 Gm15820-201ENSMUST00000201566 728 ntBASIC17.17■□□□□ 0.34
Gm11127A7VMS2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Gm11127A7VMS2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11127A7VMS2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm11127A7VMS2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm11127A7VMS2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms