Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45102-201ENSMUST00000207427 857 ntBASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14117-201ENSMUST00000122417 843 ntBASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms