Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm11175-201ENSMUST00000116172 543 ntBASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav9d-4A0A0G2JG37 Golph3-205ENSMUST00000228671 2842 ntBASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav9d-4A0A0G2JG37 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav9d-4A0A0G2JG37 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm10420-201ENSMUST00000121713 882 ntBASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav9d-4A0A0G2JG37 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9d-4A0A0G2JG37 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.33□□□□□ -0.27
Trav9d-4A0A0G2JG37 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav9d-4A0A0G2JG37 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav9d-4A0A0G2JG37 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.32□□□□□ -0.28
Trav9d-4A0A0G2JG37 Gm12366-201ENSMUST00000121722 873 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms