Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gm7143-201ENSMUST00000222811 859 ntBASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13d-4A0A0G2JFX3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms