Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mir6538-201ENSMUST00000183713 110 ntBASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3n-3A0A0G2JEM0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm11175-201ENSMUST00000116172 543 ntBASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm12366-201ENSMUST00000121722 873 ntBASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm5786-201ENSMUST00000085368 882 ntBASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3n-3A0A0G2JEM0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms