Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm9847-201ENSMUST00000052528 599 ntBASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Golph3-202ENSMUST00000226517 2359 ntBASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav9n-2A0A0G2JDP3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms