Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm43530-201ENSMUST00000195920 274 ntBASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv13-1A0A0B4J1P8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm6139-201ENSMUST00000079261 882 ntBASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trbv13-1A0A0B4J1P8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Gm8493-201ENSMUST00000196881 489 ntBASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv13-1A0A0B4J1P8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms