Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Gm43566-201ENSMUST00000196851 808 ntBASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav19A0A0B4J1K4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.6□□□□□ -0.07
Trav19A0A0B4J1K4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav19A0A0B4J1K4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav19A0A0B4J1K4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav19A0A0B4J1K4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav19A0A0B4J1K4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav19A0A0B4J1K4 Gm10232-201ENSMUST00000089221 720 ntBASIC14.58□□□□□ -0.08
Trav19A0A0B4J1K4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav19A0A0B4J1K4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav19A0A0B4J1K4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav19A0A0B4J1K4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav19A0A0B4J1K4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav19A0A0B4J1K4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Gm13238-201ENSMUST00000117655 780 ntBASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav19A0A0B4J1K4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms