Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Golph3-205ENSMUST00000228671 2842 ntBASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gm15546-201ENSMUST00000122095 826 ntBASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gm40881-201ENSMUST00000223397 166 ntBASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gm43530-201ENSMUST00000195920 274 ntBASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sirpb1aA0A0A6YYP6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms