Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.11□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.08□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ighv1-56A0A0A6YXG2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm15820-201ENSMUST00000201566 728 ntBASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm7417-201ENSMUST00000192950 473 ntBASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Etf1-202ENSMUST00000180351 108 ntBASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.04□□□□□ -0.32
Ighv1-56A0A0A6YXG2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms