Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRAV27A0A087WT01 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 AC009086.3-201ENST00000623486 1008 ntBASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV27A0A087WT01 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 LINC01960-201ENST00000563759 1884 ntBASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV27A0A087WT01 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 AC004687.1-201ENST00000579003 1625 ntBASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRAV27A0A087WT01 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV27A0A087WT01 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV27A0A087WT01 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV27A0A087WT01 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.89■□□□□ 0.77
TRAV27A0A087WT01 C11orf96-202ENST00000528572 1834 ntBASIC19.89■□□□□ 0.77
TRAV27A0A087WT01 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV27A0A087WT01 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 C17orf82-201ENST00000623772 1530 ntBASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV27A0A087WT01 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 AC137767.1-201ENST00000602918 1920 ntBASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAV27A0A087WT01 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV27A0A087WT01 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 UNC93B8-201ENST00000511903 705 ntBASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV27A0A087WT01 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms