Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav12d-3A0A075B6A4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.61□□□□□ -0.07
Trav12d-3A0A075B6A4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-3A0A075B6A4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-3A0A075B6A4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav12d-3A0A075B6A4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-3A0A075B6A4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-3A0A075B6A4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav12d-3A0A075B6A4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav12d-3A0A075B6A4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav12d-3A0A075B6A4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav12d-3A0A075B6A4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Trav12d-3A0A075B6A4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav12d-3A0A075B6A4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav12d-3A0A075B6A4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12d-3A0A075B6A4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav12d-3A0A075B6A4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms