Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav18A0A075B656 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.98■□□□□ 0.15
Trav18A0A075B656 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav18A0A075B656 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Gm22238-201ENSMUST00000175222 88 ntBASIC15.97■□□□□ 0.15
Trav18A0A075B656 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.97■□□□□ 0.15
Trav18A0A075B656 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav18A0A075B656 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.96■□□□□ 0.15
Trav18A0A075B656 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav18A0A075B656 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav18A0A075B656 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.96■□□□□ 0.14
Trav18A0A075B656 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav18A0A075B656 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav18A0A075B656 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav18A0A075B656 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
Trav18A0A075B656 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.95■□□□□ 0.14
Trav18A0A075B656 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav18A0A075B656 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav18A0A075B656 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav18A0A075B656 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav18A0A075B656 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.93■□□□□ 0.14
Trav18A0A075B656 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav18A0A075B656 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav18A0A075B656 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav18A0A075B656 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav18A0A075B656 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav18A0A075B656 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav18A0A075B656 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.91■□□□□ 0.14
Trav18A0A075B656 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms