Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav4d-3A0A075B625 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Gm6821-201ENSMUST00000107540 542 ntBASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4d-3A0A075B625 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Rarb-207ENSMUST00000225921 2756 ntBASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4d-3A0A075B625 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4d-3A0A075B625 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4d-3A0A075B625 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4d-3A0A075B625 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Trav4d-3A0A075B625 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav4d-3A0A075B625 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4d-3A0A075B625 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4d-3A0A075B625 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4d-3A0A075B625 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4d-3A0A075B625 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms