Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Cap2-205ENSMUST00000225824 1634 ntBASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gm40881-201ENSMUST00000223397 166 ntBASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15d-1-dv6d-1A0A075B624 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Gm43530-201ENSMUST00000195920 274 ntBASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.56■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15d-1-dv6d-1A0A075B624 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms