Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 AC123533.3-201ENSMUST00000228056 454 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 AC123731.1-201ENSMUST00000227417 1403 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 C86187-202ENSMUST00000209497 2415 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm28533-202ENSMUST00000190106 1346 ntTSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Siglech-203ENSMUST00000121492 1655 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Rrn3-201ENSMUST00000023363 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Ctns-201ENSMUST00000006103 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Tmem156-201ENSMUST00000043352 1565 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Padi3-202ENSMUST00000172098 3310 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm26911-201ENSMUST00000181770 1737 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Samhd1-201ENSMUST00000057725 3926 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm12420-201ENSMUST00000119869 1048 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm12269-201ENSMUST00000122273 717 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Mir6359-201ENSMUST00000183668 81 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm5738-201ENSMUST00000206016 779 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm3635-201ENSMUST00000212314 354 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 AC156274.1-201ENSMUST00000219193 634 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 AC126799.1-201ENSMUST00000221976 246 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Dkk3-201ENSMUST00000033036 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Lima1-202ENSMUST00000109024 4109 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 4933436P19Rik-201ENSMUST00000217736 1442 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Kdm4a-203ENSMUST00000106403 4536 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm32255-201ENSMUST00000219456 1349 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.29□□□□□ -0.92
Clrn1Q8K445 Etfbkmt-204ENSMUST00000111551 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Sntg1-202ENSMUST00000115488 1554 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Clrn1Q8K445 Hsd17b7-201ENSMUST00000027989 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Rasgrf1-203ENSMUST00000189545 4766 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm4926-201ENSMUST00000132691 1610 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Zfp655-202ENSMUST00000167316 4104 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Jarid2-210ENSMUST00000173704 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Ccl3-201ENSMUST00000001008 766 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm14650-201ENSMUST00000120400 889 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms