Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.61■□□□□ 0.25
Cx3cr1Q9Z0D9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm45444-201ENSMUST00000211394 898 ntBASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cr1Q9Z0D9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm7143-201ENSMUST00000222811 859 ntBASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cr1Q9Z0D9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cx3cr1Q9Z0D9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Cx3cr1Q9Z0D9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cx3cr1Q9Z0D9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cr1Q9Z0D9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Mir6538-201ENSMUST00000183713 110 ntBASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cr1Q9Z0D9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cr1Q9Z0D9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Mir6236-201ENSMUST00000184437 123 ntBASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Golph3-205ENSMUST00000228671 2842 ntBASIC16.55■□□□□ 0.24
Cx3cr1Q9Z0D9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cx3cr1Q9Z0D9 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 542 ms