Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Gm16437-201ENSMUST00000025669 507 ntBASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rhox4bQ9JI43 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.79■□□□□ 0.12
Rhox4bQ9JI43 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rhox4bQ9JI43 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rhox4bQ9JI43 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Rhox4bQ9JI43 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rhox4bQ9JI43 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rhox4bQ9JI43 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rhox4bQ9JI43 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rhox4bQ9JI43 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Grk6-206ENSMUST00000224995 2971 ntBASIC15.75■□□□□ 0.11
Rhox4bQ9JI43 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Gm11687-201ENSMUST00000118911 886 ntBASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rhox4bQ9JI43 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms