Protein–RNA interactions for Protein: Q9DBF7

Cwc25, Pre-mRNA-splicing factor CWC25 homolog, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc25Q9DBF7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cwc25Q9DBF7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cwc25Q9DBF7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.48
Cwc25Q9DBF7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cwc25Q9DBF7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Cwc25Q9DBF7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cwc25Q9DBF7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 AA386476-201ENSMUST00000098781 1665 ntBASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cwc25Q9DBF7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cwc25Q9DBF7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cwc25Q9DBF7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cwc25Q9DBF7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cwc25Q9DBF7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cwc25Q9DBF7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cwc25Q9DBF7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cwc25Q9DBF7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cwc25Q9DBF7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cwc25Q9DBF7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.25■■□□□ 1.47
Cwc25Q9DBF7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cwc25Q9DBF7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Cwc25Q9DBF7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cwc25Q9DBF7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cwc25Q9DBF7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cwc25Q9DBF7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cwc25Q9DBF7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cwc25Q9DBF7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cwc25Q9DBF7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cwc25Q9DBF7 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.23■■□□□ 1.47
Cwc25Q9DBF7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC24.23■■□□□ 1.47
Cwc25Q9DBF7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC24.22■■□□□ 1.47
Cwc25Q9DBF7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Gm43909-201ENSMUST00000203443 1876 ntBASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC24.21■■□□□ 1.47
Cwc25Q9DBF7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.2■■□□□ 1.46
Cwc25Q9DBF7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Cwc25Q9DBF7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Cwc25Q9DBF7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cwc25Q9DBF7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms