Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d4aQ9D7V1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4aQ9D7V1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4aQ9D7V1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4aQ9D7V1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4aQ9D7V1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Gm40881-201ENSMUST00000223397 166 ntBASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4aQ9D7V1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4aQ9D7V1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4aQ9D7V1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d4aQ9D7V1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms