Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldnd1Q9CQX5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.27■□□□□ 0.84
Cldnd1Q9CQX5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cldnd1Q9CQX5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cldnd1Q9CQX5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cldnd1Q9CQX5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Trmt13-210ENSMUST00000198454 880 ntBASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldnd1Q9CQX5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.25■□□□□ 0.83
Cldnd1Q9CQX5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.25■□□□□ 0.83
Cldnd1Q9CQX5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldnd1Q9CQX5 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldnd1Q9CQX5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldnd1Q9CQX5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldnd1Q9CQX5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cldnd1Q9CQX5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd1Q9CQX5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd1Q9CQX5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldnd1Q9CQX5 Gm7977-201ENSMUST00000193787 748 ntBASIC20.21■□□□□ 0.83
Cldnd1Q9CQX5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.21■□□□□ 0.83
Cldnd1Q9CQX5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldnd1Q9CQX5 Gm13534-201ENSMUST00000121169 513 ntBASIC20.2■□□□□ 0.82
Cldnd1Q9CQX5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.2■□□□□ 0.82
Cldnd1Q9CQX5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.2■□□□□ 0.82
Cldnd1Q9CQX5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldnd1Q9CQX5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldnd1Q9CQX5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd1Q9CQX5 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.19■□□□□ 0.82
Cldnd1Q9CQX5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldnd1Q9CQX5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Cldnd1Q9CQX5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd1Q9CQX5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd1Q9CQX5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd1Q9CQX5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd1Q9CQX5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cldnd1Q9CQX5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldnd1Q9CQX5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.16■□□□□ 0.82
Cldnd1Q9CQX5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms